CDS

Accession Number TCMCG007C15850
gbkey CDS
Protein Id XP_009129987.2
Location complement(join(29000319..29000375,29000586..29000658,29000755..29000850,29000950..29001215,29001693..29001809,29001885..29001961,29002052..29002198,29002275..29002311,29002380..29002449,29002531..29002641,29002817..29002971,29003053..29003160,29003241..29003350,29003454..29003541,29003620..29003676,29003762..29003859,29003933..29004011,29004097..29004178,29004666..29004838))
Gene LOC103854775
GeneID 103854775
Organism Brassica rapa

Protein

Length 666aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009131739.3
Definition transcription initiation factor TFIID subunit 5 isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category K
Description WD40 associated region in TFIID subunit, NTD2 domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K03130        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03022        [VIEW IN KEGG]
ko05168        [VIEW IN KEGG]
map03022        [VIEW IN KEGG]
map05168        [VIEW IN KEGG]
GOs GO:0000123        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000428        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000790        [VIEW IN EMBL-EBI]
GO:0001067        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005667        [VIEW IN EMBL-EBI]
GO:0005669        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006352        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006366        [VIEW IN EMBL-EBI]
GO:0006367        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0015629        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016591        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031248        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033276        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044212        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044798        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070461        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090575        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902493        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATCCAGAGCAAGTAGACGAGTTCGTCATGGGCTACTTGAAGAAGAAAGGCTTCAACAGCGCTGCTAAACATCTCCAAGAATCTCTTCACAATAACAATGGCAGCACCTTCAGCTCTATCGATTATCACAACGACCCTGAGCTCAACAAGCTCATCCGCTCCTTTTCCCAATCAGAGAATGATCCATCTCGGTACCGTGAAGGTTACAGCAAGCTAAGGTCATGGGGTTATAACTCACTGGATCTTTATAAGCATGAGTTGGTTCGAGTGATGTATCCTGTGTTTATTCATTGTTACATGGATCTAGTGGGGAAAGGGCACACTCAAGAAGCGAGATCCTTCTTTAACAGCTTCCGCAAGGATCATGAAATGGTACATCTACGGGATCTTCAGAAGCTGGGAGGCGTTCTTGCTCCATCTCATCTACAGGAAATGGAGTTTGCTCGTTCTCTTAGACAAAGCAAGATCAACATCAAAATTTGTCAGTATTCGTATGATTTATTGCTTCAGTACCTACATAGAACAGAGTCTACTCTAATGCTTGGTATTATCAACGAGCACATCAATTTCCAAGTCTACTCAGGACAGCCTAACTCCGCATCTGATGACATAGAAGCTGTCACCATTGTTGGGAGTTTTCATGAGACAGCTGATCACGTCAATCAAAAAGAAATACACTGGGGATTGCTTGAGGACTCGCTGGAAGATCGCCTGGAGAAGACGGGAGGTCTACTGTCTGATTCCGAGAAGGGACAAGGAGAAAGTAAAGCTGGGGATATGGATGATAGTAAGAAAAGATCCGCCGAAATTGGAAAGCAAGGCTCTTCCATAAAGAAGTTAAAGAAGGACAAAGCAGGAACTGCAACAACAAAAGTTGCACGTCAGGAGACCAGCACGGTGTTGTCGTCGATGCCACGTGTGAAACCGGAACTCGCCATGCCAGTAATGTCTGCGGATGTAGAGGAATCGATCCTTGAAGACCTGAGAAACCGTGTGCAGTTGAGTAGCATCGCAATGCCGTCTGTCAGCTTTTACACATTTGTTAATACTCATAACGGGTTAAACAGTTCATCTATATCTCATGATGGATCTCTGGTTGCTGGTGGGTTCTCAGATTCATCAATAAAGGTCTGGGACATGGCGAAGATAGGACAAGCTGGCAGTTGTGCGTTGCAGGATGAAAATAATCAAACCGTTGGACTAAATGGCAGAAGAAATTATACATTATTAGTGGGACACTCAGGGCCAGTTTACTCGGCCACTTTCAGTCCTCCAGGAGATTATGTTTTATCTTCTTCAGCAGATACAACAATAAGGCTGTGGAGCACAAAATTAAATGCCAATCTTGTGTGTTACAAGGGTCATAATCACACTGTATGGGATGCCCAGTTTAGCCCTTTTGGGCATTACTTTGCAAGCTGTTCTCATGATCGTACTGCGCGGATTTGGTCAATGGATAGAATGCAACCTCTGCGGATGATGGCAGGGCATCTCTCTGATGTTGATTGTGTACAGTGGCATCCTAATTGTAACTACATTGCAACCGGTTCTAGTGATAAGACGGTGAGACTCTGGGATGTACAAACAGGGGAATGTGTCAGGATATTCATTGGACACAGGAGCATGGTTTTGTCATTGGCGATGTCACCAGATGGGAGATATATGGCCTCTGGTGATGAAGATGGAACCATAATGATGTGGGACCTCTCAACAGCTCGCTGCATCACACCTCTCATGGGCCATAACTCATGTGTCTGGACTCTCTCTTACAGCGGTGAGGGCTCTCTTCTGGCTTCTGGATCTGCGGACTGCACAGTGAAACTGTGGGACGTCTCCTCAAGTACCAAATTGACAAAGGCCGAAGAAAAAAATGGGAACTCAAACAGACTGCGATCACTCAGAACTTTCCCCACTAAGTCCACACCTGTTCACGCTCTCCGATTTTCTCGGAGAAACCTGCTGTTTGCTGCAGGAGCGATCTCTAAACCCTCAAGCTGA
Protein:  
MDPEQVDEFVMGYLKKKGFNSAAKHLQESLHNNNGSTFSSIDYHNDPELNKLIRSFSQSENDPSRYREGYSKLRSWGYNSLDLYKHELVRVMYPVFIHCYMDLVGKGHTQEARSFFNSFRKDHEMVHLRDLQKLGGVLAPSHLQEMEFARSLRQSKINIKICQYSYDLLLQYLHRTESTLMLGIINEHINFQVYSGQPNSASDDIEAVTIVGSFHETADHVNQKEIHWGLLEDSLEDRLEKTGGLLSDSEKGQGESKAGDMDDSKKRSAEIGKQGSSIKKLKKDKAGTATTKVARQETSTVLSSMPRVKPELAMPVMSADVEESILEDLRNRVQLSSIAMPSVSFYTFVNTHNGLNSSSISHDGSLVAGGFSDSSIKVWDMAKIGQAGSCALQDENNQTVGLNGRRNYTLLVGHSGPVYSATFSPPGDYVLSSSADTTIRLWSTKLNANLVCYKGHNHTVWDAQFSPFGHYFASCSHDRTARIWSMDRMQPLRMMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWTLSYSGEGSLLASGSADCTVKLWDVSSSTKLTKAEEKNGNSNRLRSLRTFPTKSTPVHALRFSRRNLLFAAGAISKPSS